Kayabarr1397
Four high-spin macrocyclic Co(II) complexes with hydroxypropyl or amide pendants and appended coumarin or carbostyril fluorophores were prepared as CEST (chemical exchange saturation transfer) MRI probes. The complexes were studied in solution as paramagnetic CEST (paraCEST) agents and after loading into Saccharomyces cerevisiae yeast cells as cell-based CEST (cellCEST) agents. The fluorophores attached to the complexes through an amide linkage imparted an unusual pH dependence to the paraCEST properties of all four complexes through of ionization of a group that was attributed to the amide NH linker. The furthest shifted CEST peak for the hydroxypropyl-based complexes changed by ∼90 ppm upon increasing the pH from 5 to 7.5. At acidic pH, the Co(II) complexes exhibited three to four CEST peaks with the most highly shifted CEST peak at 200 ppm. The complexes demonstrated substantial paramagnetic water proton shifts which is a requirement for the development of cellCEST agents. The large shift in the proton resonance was attributed to an inner-sphere water at neutral pH, as shown by variable temperature 17O NMR spectroscopy studies. Labeling of yeast with one of these paraCEST agents was optimized with fluorescence microscopy and validated by using ICP mass spectrometry quantitation of cobalt. A weak asymmetry in the Z-spectra was observed in the yeast labeled with a Co(II) complex, toward a cellCEST effect, although the Co(II) complexes were toxic to the cells at the concentrations necessary for observation of cellCEST.Computations based on density functional theory (DFT) are transforming various aspects of materials research and discovery. However, the effort required to solve the central equation of DFT, namely the Kohn-Sham equation, which remains a major obstacle for studying large systems with hundreds of atoms in a practical amount of time with routine computational resources. Here, we propose a deep learning architecture that systematically learns the input-output behavior of the Kohn-Sham equation and predicts the electronic density of states, a primary output of DFT calculations, with unprecedented speed and chemical accuracy. The algorithm also adapts and progressively improves in predictive power and versatility as it is exposed to new diverse atomic configurations. We demonstrate this capability for a diverse set of carbon allotropes spanning a large configurational and phase space. The electronic density of states, along with the electronic charge density, may be used downstream to predict a variety of materials properties, bypassing the Kohn-Sham equation, leading to an ultrafast and high-fidelity DFT emulator.A major benefit of intramolecular singlet fission (iSF) materials, in which through-bond interactions mediate triplet pair formation, is the ability to control the triplet formation dynamics through molecular engineering. selleck chemicals One common design strategy is the use of molecular bridges to mediate interchromophore interactions, decreasing electronic coupling by increasing chromophore-chromophore separation. Here, we report how the judicious choice of aromatic bridges can enhance chromophore-chromophore electronic coupling. This molecular engineering strategy takes advantage of "bridge resonance", in which the frontier orbital energies are nearly degenerate with those of the covalently linked singlet fission chromophores, resulting in fast iSF even at large interchromophore separations. Using transient absorption spectroscopy, we investigate this bridge resonance effect in a series of pentacene and tetracene-bridged dimers, and we find that the rate of triplet formation is enhanced as the bridge orbitals approach resonance. This work highlights the important role of molecular connectivity in controlling the rate of iSF through chemical bonds and establishes critical design principles for future use of iSF materials in optoelectronic devices.Electron-rich phenols, including α-rac-tocopherol Ar 1 OH, 2,4,6,-tri-tert-butylphenol Ar 3 OH, and butylated hydroxy-toluene Ar 4 OH, are effective electrochemical mediators for the electrocatalytic oxidation of alcohols by an iridium amido dihyride complex (PNP)Ir(H)2 (IrN 1, PNP = bis[2-diisopropylphosphino)ethyl]amide). Addition of phenol mediators leads to a decrease in the onset potential of catalysis from -0.65 V vs Fc+/0 under unmediated conditions to -1.07 V vs Fc+/0 in the presence of phenols. Mechanistic analysis suggests that oxidative turnover of the iridium amino trihydride (PNHP)Ir(H)3 (IrH 2, PNHP = bis[2-diisopropylphosphino)ethyl]amine) to IrN 1 proceeds through two successive hydrogen atom transfers (HAT) to 2 equiv of phenoxyl that are generated transiently at the anode. Isotope studies and comparison to known systems are consistent with initial homolysis of an Ir-H bond being rate-determining. Turnover frequencies up to 14.6 s-1 and an average Faradaic efficiency of 93% are observed. The mediated system shows excellent chemoselectivity in bulk oxidations of 2-propanol and 1,2-benzenedimethanol in THF and is also viable in neat 2-propanol.Stachyose is a typical prebiotic that can be utilized by the probiotic strain Bacillus licheniformis. Pioneering X-ray crystallography has determined the structure of stachyose in complex with the solute-binding protein MsmE in B. licheniformis (BlMsmE). The present work describes a combined strategy for the identification of putative BlMsmE-specific ligands, which can be used for the development of prebiotics. After a ligand-based virtual similarity screening of a large ZINC database containing ∼22 M compounds, we identified 3575 ligands. A total of 600 structures for which the Tanimoto coefficient's value was larger than a cutoff of 0.23 were selected for molecular docking. Based on the docking scores, we identified 100 top-scoring ligands, followed by molecular dynamics (MD) simulations. During simulations, 35 candidates were abandoned because of serious steric clashes in the complexes. Finally, the top 10 ligands with free energies below an energy threshold of -50.84 kcal/mol were selected. The top two ligands were stachyose and raffinose, which have proved their health benefits as prebiotics and their safety. The remaining eight ligands were further analyzed by the in silico ADME tool; only galactinol did not violate any of the criteria required for a lead compound. These three ligands were further analyzed for understanding their binding to BlMsmE. Isothermal titration calorimetry analysis suggested that stachyose, raffinose, and galactinol bound strongly to BlMsmE with Kd values of 299, 170, and 134 nM, respectively. Microsecond MD simulations suggested significant conformational changes of BlMsmE upon ligand binding. Our results provide new insight into the thermodynamics of sugars and MsmE, which would promote the development of novel prebiotics.