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Highly oriented and crystalline polyetheylene (PE) fibers have a large failure stress under rapid tensile loading but exhibit significant creep at much smaller stresses that limits applications. A possible mechanism is slip of chains due to stress-enhanced, thermally activated nucleation of dislocations at chain ends in crystalline regions. Molecular dynamics simulations are used to parameterize a Frenkel-Kontorova model that provides analytic expressions for the limiting stress and activation energy for dislocation nucleation as a function of stress. Results from four commonly used hydrocarbon potentials are compared to show that the qualitative behavior is robust and estimate quantitative uncertainties. In all cases, the results can be described by an Eyring model with values of the zero-stress activation energy Ea0≈1.5 eV and activation volume V* ≈ 45 Å3 that are consistent with the experimental results for increasingly crystalline materials. The limiting yield stress is ∼8 GPa. These results suggest that activated dislocation nucleation at chain ends is an important mechanism for creep in highly oriented PE fibers.A new treatment is presented to account for the extreme anomalous centrifugal distortion displayed by the open-shell methylene radical. This new treatment is based on a four-dimensional approach in which both the overall rotation and the large amplitude bending mode are treated simultaneously. It accounts for the spin-rotation and spin-spin fine couplings, assumed to depend on the large amplitude bending coordinate, as well as for the hyperfine coupling. The new treatment is tested analyzing the available high-resolution data. 336 transitions, involving the ground and first excited vibrational states of the bending mode, are reproduced with a unitless standard deviation of 1.3, using 42 molecular constants. selleck kinase inhibitor Compared to a previous analysis [S. Brünken et al., J. Chem. Phys. 123, 164315 (2005)], the present analysis is more satisfactory as it accounts for a larger dataset and the ratio of the number of data to the number of varied constants is larger. The present theoretical treatment also allows us to retrieve the bending potential and the main kinetic energy term.Faithfully representing chemical environments is essential for describing materials and molecules with machine learning approaches. Here, we present a systematic classification of these representations and then investigate (i) the sensitivity to perturbations and (ii) the effective dimensionality of a variety of atomic environment representations and over a range of material datasets. link2 Representations investigated include atom centered symmetry functions, Chebyshev Polynomial Symmetry Functions (CHSF), smooth overlap of atomic positions, many-body tensor representation, and atomic cluster expansion. In area (i), we show that none of the atomic environment representations are linearly stable under tangential perturbations and that for CHSF, there are instabilities for particular choices of perturbation, which we show can be removed with a slight redefinition of the representation. In area (ii), we find that most representations can be compressed significantly without loss of precision and, further, that selecting optimal subsets of a representation method improves the accuracy of regression models built for a given dataset.We have investigated the morphological and optical properties of α- and β-phase Zinc Phthalocyanine (ZnPc) thin films for application to organic photovoltaic cells (OPVs). It was found that the α-phase is completely converted to the β-phase by thermal annealing at 220 °C under ultrahigh vacuum conditions. When the α- to β-phase transition takes place, the surface roughness of the ZnPc film became flat uniformly with a nanometer order of unevenness by anisotropic growth of crystalline grains along a lateral direction to substrates. Correspondingly, the optical absorbance of the β-phase film became greater by 1.5-2 times than that of the α-phase one in an ultraviolet-visible-near infrared (UV-vis-NIR) wavelength range, which plays a role in increasing the number of photogenerated excitons. On the contrary, time-resolved photoluminescence measurements showed that the average lifetime of excitons for the β-phase film became shorter by 1/6-1/7 than that for the α-phase one, which plays a role in decreasing the number of excitons achieving the donor/acceptor interface where excitons are separated to carriers (holes and electrons). Both the increase in the number and the shortening in the average lifetime have a trade-off relationship with each other for contribution to the photoelectric conversion efficiency of OPVs. Then, we examined an external quantum efficiency (EQE) of OPVs using the α- and β-phase films as a donor and obtained that the former OPV (α-phase) exhibits a higher EQE by ∼2 times than the latter one (β-phase) in the wavelength range of 400 nm-800 nm.Orientational ordering driven by mechanical distortion of soft substrates plays a major role in material transformation processes such as elastocapillarity and surface anchoring. We present a theoretical model of the orientational response of anisotropic rods deposited onto a surface of a soft, elastic substrate of finite thickness. We show that anisotropic rods exhibit a continuous isotropic-nematic phase transition, driven by orientational interactions between surface deposited rods. This interaction is mediated by the deformation of the underlying elastic substrate and is quantified by the Boussinesq solution adapted to the case of slender, surface deposited rods. From the microscopic rod-rod interactions, we derive the appropriate Maier-Saupe mean-field description, which includes the Boussinesq elastic free energy contribution due to the substrate elasticity, derive the conditions for the existence of a continuous orientational ordering transition, and discuss the implication of results in the soft (bio)system context.Detailed derivation of the analytical, reciprocal-space approach of Hessian calculation within the self-consistent-charge density-functional based tight-binding framework (SCC-DFTB) is presented. This approach provides an accurate and efficient way for obtaining the SCC-DFTB Hessian of periodic systems. Its superiority with respect to the traditional numerical force differentiation method is demonstrated for doped graphene, graphene nanoribbons, boron-nitride nanotubes, bulk zinc-oxide, and other systems.Thermodynamic extrapolation has previously been used to predict arbitrary structural observables in molecular simulations at temperatures (or relative chemical potentials in open-system mixtures) different from those at which the simulation was performed. This greatly reduces the computational cost in mapping out phase and structural transitions. In this work, we explore the limitations and accuracy of thermodynamic extrapolation applied to water, where qualitative shifts from anomalous to simple-fluid-like behavior are manifested through shifts in the liquid structure that occur as a function of both temperature and density. We present formulas for extrapolating in volume for canonical ensembles and demonstrate that linear extrapolations of water's structural properties are only accurate over a limited density range. On the other hand, linear extrapolation in temperature can be accurate across the entire liquid state. We contrast these extrapolations with classical perturbation theory techniques, which are more conservative and slowly converging. Indeed, we show that such behavior is expected by demonstrating exact relationships between extrapolation of free energies and well-known techniques to predict free energy differences. An ideal gas in an external field is also studied to more clearly explain these results for a toy system with fully analytical solutions. We also present a recursive interpolation strategy for predicting arbitrary structural properties of molecular fluids over a predefined range of state conditions, demonstrating its success in mapping qualitative shifts in water structure with density.The exact canonical partition function of a hard disk system in a narrow quasi-one-dimensional pore of given length and width is derived analytically in the thermodynamic limit. As a result, the many body problem is reduced to solving the single transcendental equation. The pressures along and across the pore, distributions of contact distances along the pore, and disks' transverse coordinates are found analytically and presented in the whole density range for three different pore widths. The transition from the solidlike zigzag to the liquidlike state is found to be quite sharp in the density scale but shows no genuine singularity. This transition is quantitatively described by the distribution of zigzag's windows through which disks exchange their positions across the pore. The windowlike defects vanish only in the densely packed zigzag, which is in line with a continuous Kosterlitz-Thouless transition.The absorption spectra for face-centered cubic nanoparticle dimers at various interparticle distances are investigated using time-dependent density functional tight binding. Both homodimers and heterodimers are investigated in this work. By studying nanoparticles at various interparticle distances and analyzing their vertical excitations, we found that as the interparticle distance decreases, a red shift arises from contributions of the transition dipole moment that are aligned along the z-axis with nondegenerate features; blue shifts occur for peaks that originate from transition dipole moment components in the x and y directions with double degeneracy. When the nanoparticles are similar in size, the features in the absorption spectra become more sensitive to the interparticle distances. The best-fit curves from vertical excitation energy in the form of AR-b for ΔEredshift/ΔEblueshift vs R are determined. In this way, we determined trends for absorption peak shifts and how these depend on the interparticle distance.Understanding the temperature profile across a liquid-vapor interface in the presence of phase change is essential for the accurate prediction of evaporation, boiling, and condensation. It has been shown experimentally, from non-equilibrium thermodynamics and using molecular dynamics simulations, the existence of an inverted temperature profile across an evaporating liquid-vapor interface, where the vapor-side interface temperature observes the lowest value and the vapor temperature increases away from the interface, opposite to the direction of heat flow. It is worth noting, however, that an inverted temperature profile is not always the case from other experiments and simulations. In this study, we apply non-equilibrium molecular dynamics simulations to systematically study the temperature profile across a liquid-vapor interface during phase change under various heat fluxes in a two-interface setting consisting of both an evaporating and a condensing interface. link3 The calculated vapor temperature shows different characteristics inside the Knudsen layer and in the bulk vapor. In addition, both the direction and magnitude of the vapor temperature gradient, as well as the temperature jump at the liquid-vapor interface, are functions of the applied heat flux. The interfacial entropy generation rate calculated from the vibrational density of state of the interfacial liquid and vapor molecules shows a positive production during evaporation, and the results qualitatively agree with the predictions from non-equilibrium thermodynamics.

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