Blackburnkonradsen4071

Vicia ramuliflora belongs to the Fabaceae. It is a perennial herb, with high economic value. The cpDNA of V. ramuliflora was 124,682 bp long with IR loss. It contains 109 genes, including 76 protein-coding genes, 29 tRNA genes, and 4 rRNA genes. The overall GC content is 35.1%. The phylogenetic tree indicates that Vicia species formed a monophyletic lineage with high bootstrap value. This study has provided new genome information for the phylogenetic analysis of Fabaceae.Clematis guniuensis is a new plant species in China, which distributes in both provinces of Zhejiang and Anhui with extremely small population. The whole chloroplast (CP) genome was assembled by NovoPlasty using high-throughput sequencing data generated by an Illumina Hiseq X Ten platform. The circular chloroplast genome is 159,682 bp in length, and comprises a large single copy of 79,461 bp, a small single copy of 49,156 bp, and two inverted repeats of 31,064 bp each. The CP genome contains 137 genes, including 89 protein-coding genes, eight rRNA genes, 36 tRNA genes, and four pseudogenes. All the pseudogenes were infA, rpl32, ycf1, and ndhK. Phylogenetic analysis results indicated that C. guniuensis was sister to C. trichotoma, with a support rate of 100%.The first complete chloroplast genome (cpDNA) sequence of Santalum album was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 144,101 bp in length, contains a large single copy region (LSC) of 83,796 bp and a small single copy region (SSC) of 11,277 bp, which were separated by a pair of inverted repeats (IR) regions of 24,514 bp. The genome contains 123 genes, including 80 protein-coding genes, 8 ribosomal RNA genes, and 35 transfer RNA genes. The overall GC content of the whole genome is 38.0%, and the corresponding values of the LSC, SSC, and IR regions are 35.9%, 31.4%, and 43.1%, respectively. Further phylogenomic analysis showed that S. album and Osyris alba clustered in a clade in Santalales order.Ottelia alismoides (Linn.) Pers. (Hydrocharitaceae) is an endangered submerged macrophyte in China. In his study, we assembled complete chloroplast (cp) genome of O. alismoides based on the Illumina reads. The cp genome of O. alismoides was 157,885 bp in length, including a large single copy (LSC) region of 87,707 bp and small single copy (SSC) region of 20,234 bp, separated by two inverted repeat (IR) regions of 24,972 bp each. The cp genome encoded 115 genes including 70 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The GC content of cp genome of O. alismoides is 36.6%. A maximum likelihood phylogenetic analysis revealed that O. alismoides is closely related to O. acuminate var. songmingensis.Codium fragile, a nutrient-rich green algae that is both edible and medicinal, it is called a 'rat tail' because of its unique shape, it can reach up to a metre in length and has the functions of clearing heat and detoxifying, detumescence and water, and repelling insects. The plastid genome sequence of C. fragile is 83,422 bp. A total of 105 genes were determined, including 77 protein-encoding genes, 3 rRNA genes, and 25 tRNA genes. Phylogenetic analysis showed that C. fragile clustered together into a single branch with C. simulans and Codium sp. 'arenicola' as sister branches. selleck chemicals The plastid genome analysis will help the understanding of Chlorophyta evolution.In this study, the complete mitochondrial genome of Daurian jackdaw (Corvus dauuricus, Pallas, 1776) was sequenced and deposited to GeneBank for the first time using muscle tissue. This mitochondrial genome is a circular molecule of 16921 bp in length and sequence analysis showed it contains 2 rRNA genes, 22 tRNA genes, 13 protein-coding genes and D_loop. The phylogenetic analysis basis of 12 protein-coding genes except for ND6 gene of 13 species shows that most of the genus of Corvus were grouped into two clades, and C. dauuricus was basal to all other Corvus.In this study, the complete mitochondrial genome (mitogenome) of Ostorhinchus fasciatus was first determined and its phylogenetic position was investigated. The mitogenome was 16568 bp long and showed a typical teleost orders, containing 13 protein-coding genes (PCGs), 2 ribosome RNA genes (rRNAs), 22 transfer RNA genes (tRNAs), and a D-loop region. The overall nucleotide composition included A, 25.89%; C, 30.40%; G, 17.46%; and T, 26.26%. Except for nad6 was located on the light strand, the other PCGs were encoded on the heavy strand. Phylogenetic analysis suggested that O. fasciatus shared a close relationship with Sphaeramia orbicularis and Pterapogon kauderni.Alopecurus japonicus is a weed in summer crop field, which is harmful to wheat crops. The complete plastome of A. japonicus was reported in this study. The genome was 136,408 bp in length, consisting of an 80,512 bp large single-copy region, a 12,836 bp small single-copy region, and two 21,530 bp inverted repeat regions. The GC content of this plastome was 38.3%. A total of 112 genes were annotated for the plastome of A. japonicus, containing 78 protein-coding genes (PCGs), 30 tRNAs, and 4 rRNAs. Phylogenetic analysis showed that A. japonicus was sister to Alopecurus aequalis.We assembled one mitochondrial genome of Pseudachorutes palmiensis from Illumina sequencing data. The circularized mitochondrial assembly is 17,110 bp in length, including 13 protein-coding genes, 22 transfer RNA genes, and two ribosomal RNA genes, which showed the typical insect mitochondrial gene composition, but had different order with most springtails. The overall base composition is 33.5% for A, 31.7% for T, 22.2% for C, and 12.5% for G. A phylogeny of 10 collembolans showed P. palmiensi was clustered within Neanuridae.Buddleja alternifolia is China's specialty, and scattered in northwest China. Here, we assembled and characterized the complete chloroplast (cp) genome of B. alternifolia using Illumina sequencing data for the first time. The complete cp genome was 154,280 bp in length, consisting of a pair of inverted repeats of 25,440 bp, a large single-copy (LSC) region of 85,330 bp, and a small single-copy (SSC) region of 18,070 bp. The genome encoded 115 unique genes, including 80 protein-coding genes, 31 tRNA genes, and four rRNA genes. Phylogenetic analysis based on 16 complete cp genome sequences indicated that B. alternifolia is closely related to Buddleja colvilei.