Thompsonbjerregaard7197

Stephania kwangsiensis (Menispermaceae) is a rare and critically endangered species endemic to China. Here, we first report and characterize its complete chloroplast genome sequence based on Illumina paired-end sequencing data. The complete plastid genome was 156,624 bp, which contained inverted repeats (IR) of 24,348 bp separated by a large single-copy (LSC) and a small single copy (SSC) of 87,759 bp and 20,169 bp, respectively. ERK animal study The cpDNA contains 132 genes, comprising 85 protein-coding genes, 37 tRNA genes, eight rRNA genes, and two processed pseudogenes. The overall GC content of the plastome is 38.4%. The phylogenetic analysis of 18 selected chloroplast genomes demonstrated that S. kwangsiensis is related to the congeneric S. japonica.Allium przewalskianum (Amaryllidaceae) is an important vegetable and/or condiment for Tibetans, Indians, and Nepalese in the highlands of the Himalayas. Here, we reported the complete chloroplast genome of A. przewalskianum using the next-generation sequencing method. The size of the chloroplast genome is 153,509 bp in length, including a large single copy region (LSC) of 82,302 bp, a small single copy region (SSC) of 17,717 bp, and a pair of inverted repeat (IR) regions with 26,745 bp. The A. przewalskianum chloroplast genome encodes 114 genes, including 68 protein-coding genes, 38 tRNA genes, and eight rRNA genes. Phylogenetic tree analysis suggested that A. przewalskianum was closely related to A.ampeloprasum and A.sativum.Aulacophora indica has been intensively studied since it can cause serious damage to cucurbits. Here, we reported the complete mitochondrial genome of A. indica for the first time. The mitochondrial genome is 15,730 bp in length and contained 13 protein-coding genes (PCGs), 2 rRNAs, 22 tRNAs, and an AT-rich control region. Phylogenetic tree indicated that A. indica is more closely related to Aulacophora lewisii than other Galerucinae beetles.Primula beesiana Forrest is a perennial rosette alpine species in the Sect. Proliferae of family Primulaceae. Here, the first complete chloroplast genome of P. beesiana was determined. The size of the complete chloroplast genome of P. beesiana is 150873 bp with GC content of 37.1%. The assembled genome has a typical quadripartite structure, containing a large single-copy (LSC) region was 82850 bp, a small single-copy (SSC) region was 17,651 bp, and a pair of inverted repeats (IRs) regions was 25,186 bp. There are 137 genes are annotated in the whole cp genome with 91 protein-coding genes, 8 rRNA genes, and 38 transfer RNA (tRNA) genes, including 115 unique genes, 81 unique CDSs, 30 unique tRNAs, and 4 unique rRNAs. The phylogenetic tree showed that P. beesiana is closely related to P. bulleyana.Castanea henryi（Skam）Rehd. et Wils is an important woody plant producing nuts in China. In this study, the complete chloroplast genome sequence of C. henryi was reported by using the Illumina Hiseq 2500 platform. The complete chloroplast sequence is 160,807 bp, including large single-copy (LSC) region of 90,394 bp, small single-copy (SSC) region of 18,963 bp, and a pair of invert repeats (IR) regions of 25,725 bp. Plastid genome contains 112 genes, 78 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Based on 26 chloroplast genomes, phylogenetic analysis indicates that C. henryi is closely related to C. mollissima in Fagaceae.There is a lack of genomic information on Calidris tenuirostris, which can provide valuable resource for genetic diversity and conservation biology. The complete mitogenome of C. tenuirostris was 16,775 bp in length and contained 13 protein-coding genes (PCGs), 2 ribosomal RNA (rRNA) genes, 22 transfer RNA (tRNA) genes and 1 control region (D-loop). The overall nucleotide composition was 31.10% A, 24.9% T, 30.10% C and 13.9% G. The start codon (ATG) and end codon (TAA) were usual. Phylogenomic analysis using mitogenomes supports monophyly of Scolopacidae, and help us understand the evolutionary relationship in charadriiformes.Tinospora sagittata is a perennial vine of the family Menispermaceae and distributed in Hunan, Hubei, Guangxi, and Sichuan province of P. R. China. It has been used in Chinese traditional medicine for centuries. The chloroplast (cp) genome of T. sagittata, characterized using Illumina technology, is 163,662 bp in size. There are a total of 130 genes, coding for 85 proteins, 37 tRNAs, and 8 rRNAs. Phylogenetic relationship analysis based on 16 complete cp genome sequences exhibited that T. sagittata was phylogenetically closer to Menispermum dauricum and Stephania japonica.The complete chloroplast genome sequence of Populus mexicana was characterized from Illumina pair-end sequencing. The chloroplast genome of P. mexicana was 156,188 bp in length, containing a large single-copy region (LSC) of 86,871 bp, a small single-copy region (SSC) of 16,559 bp, and 2 inverted repeat (IR) regions of 26,377 bp. The overall GC content is 36.74%, while the corresponding values of the LSC, SSC, and IR regions are 64.8, 69.3, and 60.3, respectively. The genome contains 111 complete genes, including 72 protein-coding genes (62 protein-coding gene species), 31 tRNA genes (29 tRNA species), and 8 rRNA genes (4 rRNA species). The neighbor-joining phylogenetic analysis showed that P. mexicana and Populus fremontii clustered together as sisters to other Populus species.Tolypocladium sp. YFCC 1805002, an undescribed species isolated from natural Ophiocordyces sinensis in Baima Snow Mountain, Deqin County of Yunnan in Southwestern China, was sequenced on the Illumina sequencing platform. The complete mitochondrial genome of this fungus is a circular molecule of 46,466 bp in length, and this value is higher than its two relatives T. inflatum and T. ophioglossoides. The circular mitogenome contains 15 protein-coding genes (PCGs), a set of 25 transfer RNA (tRNA) genes, and 2 ribosomal RNA (rns and rnl) genes. The 15 protein-coding genes are atp6, 8-9, cob, cox1-3, nad1-6, nad4L and rps3. The lengths of 25 transfer RNA (tRNA) genes are ranging from 71 to 87 bp, and the sizes of rns and rnl are 1554 bp and 5931 bp, respectively. The overall base composition is 38.3% A, 35.6% T, 11.6% C, 14.5% G, with a low GC content of 26.1%. Phylogenetic analysis inferred from concatenated protein-coding genes of 51 taxa shows that the new species Tolypocladium sp. YFCC 1805002 is closely related to T.